Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm17807-201ENSMUST00000186869 298 ntBASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm1Q8VC85 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Gm6296-201ENSMUST00000222599 943 ntBASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm1Q8VC85 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Gm11780-201ENSMUST00000136880 516 ntBASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Lsm1Q8VC85 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms