Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Gm13168-201ENSMUST00000121771 632 ntBASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Gm12382-201ENSMUST00000122005 922 ntBASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc9Q8VC31 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.3■□□□□ 0.52
Ccdc9Q8VC31 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc9Q8VC31 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Gm43183-201ENSMUST00000200632 547 ntBASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc9Q8VC31 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Gm10698-201ENSMUST00000182663 604 ntBASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc9Q8VC31 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms