Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Top1mtQ8R4U6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Mir5131-201ENSMUST00000175426 93 ntBASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Top1mtQ8R4U6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Gm13036-201ENSMUST00000117799 748 ntBASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Gm4899-201ENSMUST00000178708 719 ntBASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.13■□□□□ 0.49
Top1mtQ8R4U6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Gm18195-201ENSMUST00000207604 706 ntBASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Top1mtQ8R4U6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms