Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Gm5864-201ENSMUST00000202263 970 ntBASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Mir8098-201ENSMUST00000184011 137 ntBASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tmc1Q8R4P5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmc1Q8R4P5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm8825-201ENSMUST00000182565 998 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm4518-201ENSMUST00000182638 718 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.53■□□□□ 0.56
Tmc1Q8R4P5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms