Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.04□□□□□ -0.16
Rfc3Q8R323 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.04□□□□□ -0.16
Rfc3Q8R323 Gm14822-201ENSMUST00000122247 291 ntBASIC14.04□□□□□ -0.16
Rfc3Q8R323 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.04□□□□□ -0.16
Rfc3Q8R323 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc3Q8R323 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Gm11764-201ENSMUST00000120221 623 ntBASIC14.03□□□□□ -0.16
Rfc3Q8R323 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.03□□□□□ -0.16
Rfc3Q8R323 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.03□□□□□ -0.16
Rfc3Q8R323 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.03□□□□□ -0.16
Rfc3Q8R323 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc3Q8R323 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc3Q8R323 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.02□□□□□ -0.17
Rfc3Q8R323 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc3Q8R323 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.02□□□□□ -0.17
Rfc3Q8R323 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms