Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Gm14822-201ENSMUST00000122247 291 ntBASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpp40Q8R1F9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Gm15427-201ENSMUST00000117288 531 ntBASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpp40Q8R1F9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Gm24513-201ENSMUST00000174964 138 ntBASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Gm27702-201ENSMUST00000184512 56 ntBASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpp40Q8R1F9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpp40Q8R1F9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Rpp40Q8R1F9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rpp40Q8R1F9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpp40Q8R1F9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpp40Q8R1F9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rpp40Q8R1F9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms