Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Gm12008-201ENSMUST00000117791 755 ntBASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf4Q8K4J2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Gm10052-201ENSMUST00000168019 960 ntBASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Gm7729-201ENSMUST00000050143 801 ntBASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf4Q8K4J2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ebf4Q8K4J2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Ebf4Q8K4J2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms