Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn4rl1Q8K0S5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Celf4-206ENSMUST00000224553 1729 ntBASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm5566-201ENSMUST00000116118 459 ntBASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm27838-201ENSMUST00000184829 128 ntBASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Shd-206ENSMUST00000225145 998 ntBASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.24■□□□□ 0.03
Rtn4rl1Q8K0S5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm43767-201ENSMUST00000198933 381 ntBASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rl1Q8K0S5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm5479-201ENSMUST00000160578 435 ntBASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Rtn4rl1Q8K0S5 App-207ENSMUST00000227737 2827 ntBASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms