Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Gm11543-201ENSMUST00000120758 370 ntBASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Gm43125-201ENSMUST00000201724 730 ntBASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rftn2Q8CHX7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Gm43474-201ENSMUST00000196415 774 ntBASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rftn2Q8CHX7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Gm25287-201ENSMUST00000103846 110 ntBASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Gm22918-201ENSMUST00000103855 110 ntBASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Gm15920-201ENSMUST00000118998 402 ntBASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms