Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm24659-201ENSMUST00000180212 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24169-201ENSMUST00000180244 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm23689-201ENSMUST00000180354 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm27359-201ENSMUST00000184153 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm27785-201ENSMUST00000184268 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm27466-201ENSMUST00000184396 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm27703-201ENSMUST00000184836 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab11fip3Q8CHD8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rab11fip3Q8CHD8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rab11fip3Q8CHD8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Gm2810-201ENSMUST00000118681 990 ntBASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Gm13616-201ENSMUST00000120600 222 ntBASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms