Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup88Q8CEC0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nup88Q8CEC0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nup88Q8CEC0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Nup88Q8CEC0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nup88Q8CEC0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nup88Q8CEC0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Nup88Q8CEC0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nup88Q8CEC0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.89■□□□□ 0.45
Nup88Q8CEC0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup88Q8CEC0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Gm9727-201ENSMUST00000161387 555 ntBASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup88Q8CEC0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup88Q8CEC0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup88Q8CEC0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup88Q8CEC0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.86■□□□□ 0.45
Nup88Q8CEC0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms