Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm16198-201ENSMUST00000118766 670 ntBASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf31Q8CCF0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Gm9385-201ENSMUST00000117563 472 ntBASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Gm2272-201ENSMUST00000194903 582 ntBASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf31Q8CCF0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Chchd1-203ENSMUST00000224633 557 ntBASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf31Q8CCF0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms