Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.56■□□□□ 0.4
Shisa4Q8CA71 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Gm16026-204ENSMUST00000162652 683 ntBASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Gm45612-201ENSMUST00000211320 160 ntBASIC17.55■□□□□ 0.4
Shisa4Q8CA71 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa4Q8CA71 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa4Q8CA71 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Gm27321-201ENSMUST00000185021 205 ntBASIC17.53■□□□□ 0.4
Shisa4Q8CA71 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Shisa4Q8CA71 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa4Q8CA71 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms