Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Gm27525-201ENSMUST00000184465 107 ntBASIC15.98■□□□□ 0.15
Uba3Q8C878 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.98■□□□□ 0.15
Uba3Q8C878 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.98■□□□□ 0.15
Uba3Q8C878 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uba3Q8C878 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.98■□□□□ 0.15
Uba3Q8C878 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.97■□□□□ 0.15
Uba3Q8C878 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.97■□□□□ 0.15
Uba3Q8C878 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.97■□□□□ 0.15
Uba3Q8C878 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Uba3Q8C878 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Uba3Q8C878 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Uba3Q8C878 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Uba3Q8C878 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Uba3Q8C878 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.96■□□□□ 0.15
Uba3Q8C878 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.96■□□□□ 0.15
Uba3Q8C878 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.96■□□□□ 0.15
Uba3Q8C878 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Uba3Q8C878 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Uba3Q8C878 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Uba3Q8C878 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.96■□□□□ 0.15
Uba3Q8C878 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Uba3Q8C878 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uba3Q8C878 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Uba3Q8C878 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Uba3Q8C878 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
Uba3Q8C878 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Uba3Q8C878 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Uba3Q8C878 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Uba3Q8C878 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.95■□□□□ 0.14
Uba3Q8C878 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.95■□□□□ 0.14
Uba3Q8C878 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.95■□□□□ 0.14
Uba3Q8C878 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uba3Q8C878 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uba3Q8C878 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Uba3Q8C878 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Uba3Q8C878 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uba3Q8C878 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uba3Q8C878 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms