Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Gm9824-201ENSMUST00000178707 561 ntBASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a6Q8C6K9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a6Q8C6K9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a6Q8C6K9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col6a6Q8C6K9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col6a6Q8C6K9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.23
Col6a6Q8C6K9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm28631-201ENSMUST00000190740 334 ntBASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms