Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Gm11452-201ENSMUST00000122376 690 ntBASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh20Q8BIZ0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh20Q8BIZ0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh20Q8BIZ0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh20Q8BIZ0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh20Q8BIZ0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms