Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc40Q8BI79 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Sybu-209ENSMUST00000228639 4113 ntBASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc40Q8BI79 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Gm14722-201ENSMUST00000118943 689 ntBASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Gm28033-201ENSMUST00000184224 96 ntBASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms