Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Samm50Q8BGH2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Samm50Q8BGH2 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gm18733-201ENSMUST00000173950 856 ntBASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.79■□□□□ 0.44
Samm50Q8BGH2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Samm50Q8BGH2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms