Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Gm10252-201ENSMUST00000209541 832 ntBASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Trim6Q8BGE7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim6Q8BGE7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm6345-202ENSMUST00000180900 204 ntBASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim6Q8BGE7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim6Q8BGE7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Gm13312-201ENSMUST00000119631 718 ntBASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim6Q8BGE7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms