Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Gm18733-201ENSMUST00000173950 856 ntBASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4bQ8BGE6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4bQ8BGE6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg4bQ8BGE6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms