Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Gm6345-202ENSMUST00000180900 204 ntBASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3bQ80YF6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Upk3bQ80YF6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Gm8344-201ENSMUST00000119813 856 ntBASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Gm44454-201ENSMUST00000198541 138 ntBASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3bQ80YF6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms