Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Gm8344-201ENSMUST00000119813 856 ntBASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Rprl2-201ENSMUST00000157150 290 ntBASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Gm43125-201ENSMUST00000201724 730 ntBASIC17.5■□□□□ 0.39
Prpf40bQ80W14 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf40bQ80W14 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm27437-201ENSMUST00000183429 107 ntBASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40bQ80W14 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Gm15358-201ENSMUST00000119249 520 ntBASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.48■□□□□ 0.39
Prpf40bQ80W14 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40bQ80W14 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Gm5866-201ENSMUST00000177881 973 ntBASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms