Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh19Q80TF3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Gm2272-201ENSMUST00000194903 582 ntBASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Chchd1-203ENSMUST00000224633 557 ntBASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdh19Q80TF3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.85□□□□□ -0.03
Pcdh19Q80TF3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms