Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Ldb3-207ENSMUST00000227819 1499 ntBASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Gm45384-201ENSMUST00000210451 277 ntBASIC23.31■■□□□ 1.32
Rpap1Q80TE0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpap1Q80TE0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Gm20445-201ENSMUST00000061905 565 ntBASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpap1Q80TE0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Gm13464-201ENSMUST00000119418 935 ntBASIC23.29■■□□□ 1.32
Rpap1Q80TE0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Gm16476-201ENSMUST00000221544 139 ntBASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpap1Q80TE0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpap1Q80TE0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Gm8242-201ENSMUST00000193029 1420 ntBASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC23.27■■□□□ 1.32
Rpap1Q80TE0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Gm4691-201ENSMUST00000182339 1000 ntBASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Gm6944-201ENSMUST00000182449 1006 ntBASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Gm2451-201ENSMUST00000199447 999 ntBASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Gm10290-201ENSMUST00000200451 999 ntBASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Gm9908-201ENSMUST00000211534 448 ntBASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 AC125350.2-201ENSMUST00000224737 727 ntBASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms