Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Gm15358-201ENSMUST00000119249 520 ntBASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Gm7862-201ENSMUST00000121461 292 ntBASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Gm18195-201ENSMUST00000207604 706 ntBASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ParpbpQ6IRT3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.26□□□□□ -0.13
ParpbpQ6IRT3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ParpbpQ6IRT3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Gm7222-201ENSMUST00000117512 906 ntBASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Gm7230-201ENSMUST00000173026 815 ntBASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Gm10060-201ENSMUST00000212002 111 ntBASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ParpbpQ6IRT3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms