Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Col11a2Q64739 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col11a2Q64739 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.1■□□□□ 0.49
Col11a2Q64739 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.1■□□□□ 0.49
Col11a2Q64739 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col11a2Q64739 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.09■□□□□ 0.49
Col11a2Q64739 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm9002-201ENSMUST00000178437 499 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.09■□□□□ 0.49
Col11a2Q64739 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm45331-201ENSMUST00000209868 554 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.09■□□□□ 0.49
Col11a2Q64739 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Mir1894-201ENSMUST00000122802 81 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.09■□□□□ 0.49
Col11a2Q64739 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Olfr286-202ENSMUST00000205305 969 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.09■□□□□ 0.49
Col11a2Q64739 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.09■□□□□ 0.49
Col11a2Q64739 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col11a2Q64739 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col11a2Q64739 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.08■□□□□ 0.49
Col11a2Q64739 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Col11a2Q64739 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col11a2Q64739 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Col11a2Q64739 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col11a2Q64739 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col11a2Q64739 Gm12390-201ENSMUST00000117897 397 ntBASIC18.08■□□□□ 0.48
Col11a2Q64739 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.08■□□□□ 0.48
Col11a2Q64739 Gm8062-201ENSMUST00000139696 444 ntBASIC18.08■□□□□ 0.48
Col11a2Q64739 Gm6916-202ENSMUST00000205523 195 ntBASIC18.08■□□□□ 0.48
Col11a2Q64739 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.08■□□□□ 0.48
Col11a2Q64739 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Col11a2Q64739 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col11a2Q64739 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col11a2Q64739 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Gm12957-201ENSMUST00000117835 377 ntBASIC18.07■□□□□ 0.48
Col11a2Q64739 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col11a2Q64739 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col11a2Q64739 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.06■□□□□ 0.48
Col11a2Q64739 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col11a2Q64739 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms