Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn1Q64347 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.18■□□□□ 0.66
Clcn1Q64347 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn1Q64347 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn1Q64347 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Clcn1Q64347 Gm27430-201ENSMUST00000184585 107 ntBASIC19.17■□□□□ 0.66
Clcn1Q64347 Gm44333-201ENSMUST00000197168 107 ntBASIC19.17■□□□□ 0.66
Clcn1Q64347 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.17■□□□□ 0.66
Clcn1Q64347 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.17■□□□□ 0.66
Clcn1Q64347 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.17■□□□□ 0.66
Clcn1Q64347 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn1Q64347 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clcn1Q64347 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Clcn1Q64347 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.17■□□□□ 0.66
Clcn1Q64347 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn1Q64347 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Gm14722-201ENSMUST00000118943 689 ntBASIC19.16■□□□□ 0.66
Clcn1Q64347 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clcn1Q64347 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.16■□□□□ 0.66
Clcn1Q64347 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.16■□□□□ 0.66
Clcn1Q64347 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clcn1Q64347 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn1Q64347 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clcn1Q64347 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Clcn1Q64347 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clcn1Q64347 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcn1Q64347 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcn1Q64347 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn1Q64347 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clcn1Q64347 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn1Q64347 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn1Q64347 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.14■□□□□ 0.66
Clcn1Q64347 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.14■□□□□ 0.65
Clcn1Q64347 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.14■□□□□ 0.65
Clcn1Q64347 Gm15483-201ENSMUST00000120338 456 ntBASIC19.14■□□□□ 0.65
Clcn1Q64347 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms