Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.97□□□□□ -0.33
Sox19Q62249 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox19Q62249 Gm13559-201ENSMUST00000120476 863 ntBASIC12.97□□□□□ -0.33
Sox19Q62249 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox19Q62249 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox19Q62249 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox19Q62249 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
Sox19Q62249 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox19Q62249 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox19Q62249 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox19Q62249 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.97□□□□□ -0.33
Sox19Q62249 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox19Q62249 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox19Q62249 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Sox19Q62249 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sox19Q62249 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Sox19Q62249 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox19Q62249 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox19Q62249 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Gm25406-201ENSMUST00000157599 105 ntBASIC12.96□□□□□ -0.33
Sox19Q62249 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox19Q62249 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox19Q62249 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.96□□□□□ -0.33
Sox19Q62249 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.96□□□□□ -0.33
Sox19Q62249 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.96□□□□□ -0.33
Sox19Q62249 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox19Q62249 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox19Q62249 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.96□□□□□ -0.34
Sox19Q62249 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.96□□□□□ -0.34
Sox19Q62249 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox19Q62249 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox19Q62249 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Sox19Q62249 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.96□□□□□ -0.34
Sox19Q62249 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox19Q62249 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox19Q62249 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.95□□□□□ -0.34
Sox19Q62249 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox19Q62249 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox19Q62249 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox19Q62249 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox19Q62249 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.94□□□□□ -0.34
Sox19Q62249 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox19Q62249 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.94□□□□□ -0.34
Sox19Q62249 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox19Q62249 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox19Q62249 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms