Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn9aQ62205 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Gm27631-201ENSMUST00000184163 466 ntBASIC17.63■□□□□ 0.41
Scn9aQ62205 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.63■□□□□ 0.41
Scn9aQ62205 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Gm37917-201ENSMUST00000194711 392 ntBASIC17.63■□□□□ 0.41
Scn9aQ62205 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Scn9aQ62205 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.63■□□□□ 0.41
Scn9aQ62205 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn9aQ62205 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.62■□□□□ 0.41
Scn9aQ62205 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.62■□□□□ 0.41
Scn9aQ62205 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.62■□□□□ 0.41
Scn9aQ62205 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn9aQ62205 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn9aQ62205 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scn9aQ62205 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn9aQ62205 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Gm15824-201ENSMUST00000119516 955 ntBASIC17.61■□□□□ 0.41
Scn9aQ62205 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn9aQ62205 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.61■□□□□ 0.41
Scn9aQ62205 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn9aQ62205 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn9aQ62205 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn9aQ62205 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.6■□□□□ 0.41
Scn9aQ62205 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.6■□□□□ 0.41
Scn9aQ62205 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.6■□□□□ 0.41
Scn9aQ62205 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms