Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctr9Q62018 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.87■□□□□ 0.45
Ctr9Q62018 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ctr9Q62018 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctr9Q62018 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctr9Q62018 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ctr9Q62018 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctr9Q62018 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.86■□□□□ 0.45
Ctr9Q62018 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Gm16198-201ENSMUST00000118766 670 ntBASIC17.86■□□□□ 0.45
Ctr9Q62018 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Gm27301-201ENSMUST00000184012 127 ntBASIC17.86■□□□□ 0.45
Ctr9Q62018 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ctr9Q62018 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctr9Q62018 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Gm15427-201ENSMUST00000117288 531 ntBASIC17.85■□□□□ 0.45
Ctr9Q62018 Gm9385-201ENSMUST00000117563 472 ntBASIC17.85■□□□□ 0.45
Ctr9Q62018 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.85■□□□□ 0.45
Ctr9Q62018 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.85■□□□□ 0.45
Ctr9Q62018 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ctr9Q62018 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ctr9Q62018 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.84■□□□□ 0.45
Ctr9Q62018 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.84■□□□□ 0.45
Ctr9Q62018 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.84■□□□□ 0.45
Ctr9Q62018 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.84■□□□□ 0.45
Ctr9Q62018 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ctr9Q62018 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctr9Q62018 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctr9Q62018 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.83■□□□□ 0.45
Ctr9Q62018 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
Ctr9Q62018 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctr9Q62018 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctr9Q62018 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ctr9Q62018 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctr9Q62018 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctr9Q62018 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctr9Q62018 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctr9Q62018 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctr9Q62018 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ctr9Q62018 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.83■□□□□ 0.44
Ctr9Q62018 Gm2272-201ENSMUST00000194903 582 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms