Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ift88Q61371 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.82■□□□□ 0.28
Ift88Q61371 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ift88Q61371 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ift88Q61371 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.81■□□□□ 0.28
Ift88Q61371 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.81■□□□□ 0.28
Ift88Q61371 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Gm8655-201ENSMUST00000221159 852 ntBASIC16.81■□□□□ 0.28
Ift88Q61371 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.81■□□□□ 0.28
Ift88Q61371 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ift88Q61371 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ift88Q61371 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift88Q61371 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ift88Q61371 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ift88Q61371 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.8■□□□□ 0.28
Ift88Q61371 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.8■□□□□ 0.28
Ift88Q61371 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.8■□□□□ 0.28
Ift88Q61371 Gm27704-201ENSMUST00000185094 107 ntBASIC16.8■□□□□ 0.28
Ift88Q61371 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Ift88Q61371 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.8■□□□□ 0.28
Ift88Q61371 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.8■□□□□ 0.28
Ift88Q61371 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.8■□□□□ 0.28
Ift88Q61371 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift88Q61371 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ift88Q61371 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.79■□□□□ 0.28
Ift88Q61371 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
Ift88Q61371 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ift88Q61371 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.79■□□□□ 0.28
Ift88Q61371 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.79■□□□□ 0.28
Ift88Q61371 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ift88Q61371 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ift88Q61371 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.79■□□□□ 0.28
Ift88Q61371 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.79■□□□□ 0.28
Ift88Q61371 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms