Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Gm6180-201ENSMUST00000065243 498 ntBASIC17.49■□□□□ 0.39
Foxd1Q61345 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Foxd1Q61345 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.48■□□□□ 0.39
Foxd1Q61345 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Gm25144-201ENSMUST00000179561 110 ntBASIC17.48■□□□□ 0.39
Foxd1Q61345 Gm25352-201ENSMUST00000179815 110 ntBASIC17.48■□□□□ 0.39
Foxd1Q61345 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Foxd1Q61345 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.48■□□□□ 0.39
Foxd1Q61345 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Foxd1Q61345 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Foxd1Q61345 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.48■□□□□ 0.39
Foxd1Q61345 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Foxd1Q61345 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd1Q61345 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.47■□□□□ 0.39
Foxd1Q61345 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.47■□□□□ 0.39
Foxd1Q61345 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.47■□□□□ 0.39
Foxd1Q61345 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.47■□□□□ 0.39
Foxd1Q61345 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.47■□□□□ 0.39
Foxd1Q61345 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.47■□□□□ 0.39
Foxd1Q61345 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.47■□□□□ 0.39
Foxd1Q61345 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Grk6-207ENSMUST00000225925 2769 ntBASIC17.47■□□□□ 0.39
Foxd1Q61345 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd1Q61345 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Foxd1Q61345 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.47■□□□□ 0.39
Foxd1Q61345 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Foxd1Q61345 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Foxd1Q61345 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.46■□□□□ 0.39
Foxd1Q61345 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Gm8410-201ENSMUST00000117225 605 ntBASIC17.46■□□□□ 0.39
Foxd1Q61345 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Foxd1Q61345 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.46■□□□□ 0.39
Foxd1Q61345 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Foxd1Q61345 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Foxd1Q61345 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.46■□□□□ 0.39
Foxd1Q61345 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxd1Q61345 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Foxd1Q61345 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxd1Q61345 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Foxd1Q61345 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.45■□□□□ 0.38
Foxd1Q61345 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Foxd1Q61345 Gm6415-201ENSMUST00000118488 348 ntBASIC17.45■□□□□ 0.38
Foxd1Q61345 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.45■□□□□ 0.38
Foxd1Q61345 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxd1Q61345 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.45■□□□□ 0.38
Foxd1Q61345 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.45■□□□□ 0.38
Foxd1Q61345 Gm6888-201ENSMUST00000221983 706 ntBASIC17.45■□□□□ 0.38
Foxd1Q61345 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxd1Q61345 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Foxd1Q61345 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms