Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.75■□□□□ 0.27
Col11a1Q61245 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Col11a1Q61245 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col11a1Q61245 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Col11a1Q61245 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.75■□□□□ 0.27
Col11a1Q61245 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.75■□□□□ 0.27
Col11a1Q61245 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.75■□□□□ 0.27
Col11a1Q61245 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a1Q61245 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.74■□□□□ 0.27
Col11a1Q61245 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col11a1Q61245 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Col11a1Q61245 BC001981-202ENSMUST00000191393 1545 ntBASIC16.74■□□□□ 0.27
Col11a1Q61245 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Gm33320-201ENSMUST00000192232 530 ntBASIC16.74■□□□□ 0.27
Col11a1Q61245 AA619741-201ENSMUST00000195095 646 ntBASIC16.74■□□□□ 0.27
Col11a1Q61245 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col11a1Q61245 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.74■□□□□ 0.27
Col11a1Q61245 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a1Q61245 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.73■□□□□ 0.27
Col11a1Q61245 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Gm12390-201ENSMUST00000117897 397 ntBASIC16.73■□□□□ 0.27
Col11a1Q61245 Gm15806-201ENSMUST00000120696 955 ntBASIC16.73■□□□□ 0.27
Col11a1Q61245 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.73■□□□□ 0.27
Col11a1Q61245 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Col11a1Q61245 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.73■□□□□ 0.27
Col11a1Q61245 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.73■□□□□ 0.27
Col11a1Q61245 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.73■□□□□ 0.27
Col11a1Q61245 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.73■□□□□ 0.27
Col11a1Q61245 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col11a1Q61245 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.72■□□□□ 0.27
Col11a1Q61245 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.72■□□□□ 0.27
Col11a1Q61245 Gm8062-201ENSMUST00000139696 444 ntBASIC16.72■□□□□ 0.27
Col11a1Q61245 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col11a1Q61245 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.71■□□□□ 0.27
Col11a1Q61245 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Col11a1Q61245 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col11a1Q61245 Gm12957-201ENSMUST00000117835 377 ntBASIC16.71■□□□□ 0.27
Col11a1Q61245 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.71■□□□□ 0.27
Col11a1Q61245 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Gm5354-201ENSMUST00000182417 973 ntBASIC16.71■□□□□ 0.27
Col11a1Q61245 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.71■□□□□ 0.27
Col11a1Q61245 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col11a1Q61245 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col11a1Q61245 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.71■□□□□ 0.26
Col11a1Q61245 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col11a1Q61245 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms