Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfaip3Q60769 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.27□□□□□ -0.12
Tnfaip3Q60769 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfaip3Q60769 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.26□□□□□ -0.13
Tnfaip3Q60769 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.26□□□□□ -0.13
Tnfaip3Q60769 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfaip3Q60769 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Gm13597-201ENSMUST00000121239 375 ntBASIC14.25□□□□□ -0.13
Tnfaip3Q60769 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Gm10175-201ENSMUST00000086013 645 ntBASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tnfaip3Q60769 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms