Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Gm44454-201ENSMUST00000198541 138 ntBASIC14.46□□□□□ -0.09
Nr1h4Q60641 Gm17808-201ENSMUST00000200859 894 ntBASIC14.46□□□□□ -0.09
Nr1h4Q60641 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.46□□□□□ -0.09
Nr1h4Q60641 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nr1h4Q60641 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nr1h4Q60641 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nr1h4Q60641 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Mir3081-201ENSMUST00000175305 84 ntBASIC14.44□□□□□ -0.1
Nr1h4Q60641 Gm29518-201ENSMUST00000190858 372 ntBASIC14.44□□□□□ -0.1
Nr1h4Q60641 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.44□□□□□ -0.1
Nr1h4Q60641 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nr1h4Q60641 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms