Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pabpn1lQ5XFR0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pabpn1lQ5XFR0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pabpn1lQ5XFR0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gm6257-201ENSMUST00000163864 910 ntBASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.22■□□□□ 0.03
Pabpn1lQ5XFR0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pabpn1lQ5XFR0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms