Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Gm7775-201ENSMUST00000218871 853 ntBASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf1Q5U4C3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Gm23547-201ENSMUST00000158210 271 ntBASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Gm45098-201ENSMUST00000207179 657 ntBASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf1Q5U4C3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Gm27838-201ENSMUST00000184829 128 ntBASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf1Q5U4C3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scaf1Q5U4C3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Gm24543-201ENSMUST00000103867 82 ntBASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Gm14719-201ENSMUST00000121891 340 ntBASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Gm5866-201ENSMUST00000177881 973 ntBASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Gm44344-201ENSMUST00000200287 129 ntBASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms