Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps54Q5SPW0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Vps54Q5SPW0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps54Q5SPW0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps54Q5SPW0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Gm17271-201ENSMUST00000165535 355 ntBASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Gm27301-201ENSMUST00000184012 127 ntBASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vps54Q5SPW0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Gm27702-201ENSMUST00000184512 56 ntBASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Gm2213-201ENSMUST00000197485 688 ntBASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vps54Q5SPW0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vps54Q5SPW0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms