Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.73□□□□□ -0.37
Trav6d-4Q5R1I0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-4Q5R1I0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms