Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Gm24589-201ENSMUST00000116692 94 ntBASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Gm27459-201ENSMUST00000184860 107 ntBASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.07□□□□□ -0.32
Trav5d-4Q5R1F6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5d-4Q5R1F6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5d-4Q5R1F6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5d-4Q5R1F6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav5d-4Q5R1F6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5d-4Q5R1F6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms