Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Gm27459-201ENSMUST00000184860 107 ntBASIC15.72■□□□□ 0.11
Trim80Q3V061 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.72■□□□□ 0.11
Trim80Q3V061 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim80Q3V061 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim80Q3V061 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim80Q3V061 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim80Q3V061 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim80Q3V061 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Trim80Q3V061 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim80Q3V061 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim80Q3V061 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim80Q3V061 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim80Q3V061 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim80Q3V061 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim80Q3V061 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.7■□□□□ 0.1
Trim80Q3V061 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim80Q3V061 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Trim80Q3V061 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trim80Q3V061 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.69■□□□□ 0.1
Trim80Q3V061 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim80Q3V061 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim80Q3V061 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim80Q3V061 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim80Q3V061 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms