Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Gm15794-201ENSMUST00000120182 631 ntBASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Gm44430-201ENSMUST00000203376 995 ntBASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Carlr-201ENSMUST00000181515 2574 ntBASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa3Q3UPR0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Olfr129-201ENSMUST00000122318 993 ntBASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Ank2-226ENSMUST00000189368 339 ntBASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shisa3Q3UPR0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.11□□□□□ -0.31
Shisa3Q3UPR0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms