Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-3Q3UHX8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Rpph1-201ENSMUST00000175096 319 ntBASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-3Q3UHX8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Gm20553-201ENSMUST00000204205 844 ntBASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Gm45612-201ENSMUST00000211320 160 ntBASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx6-3Q3UHX8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-3Q3UHX8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-3Q3UHX8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-3Q3UHX8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms