Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Npas1P97459 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Npas1P97459 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Gm15039-201ENSMUST00000118914 875 ntBASIC12.76□□□□□ -0.37
Npas1P97459 Gm13474-201ENSMUST00000122466 815 ntBASIC12.76□□□□□ -0.37
Npas1P97459 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.76□□□□□ -0.37
Npas1P97459 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Npas1P97459 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Npas1P97459 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Npas1P97459 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Npas1P97459 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Npas1P97459 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Npas1P97459 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Npas1P97459 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Npas1P97459 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.75□□□□□ -0.37
Npas1P97459 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Npas1P97459 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Npas1P97459 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Npas1P97459 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npas1P97459 Gm10812-201ENSMUST00000099864 546 ntBASIC12.75□□□□□ -0.37
Npas1P97459 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.74□□□□□ -0.37
Npas1P97459 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.74□□□□□ -0.37
Npas1P97459 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.74□□□□□ -0.37
Npas1P97459 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms