Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.12□□□□□ -0.15
SgcdP82347 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.12□□□□□ -0.15
SgcdP82347 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.12□□□□□ -0.15
SgcdP82347 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SgcdP82347 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.12□□□□□ -0.15
SgcdP82347 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcdP82347 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.12□□□□□ -0.15
SgcdP82347 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcdP82347 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SgcdP82347 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SgcdP82347 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcdP82347 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcdP82347 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.11□□□□□ -0.15
SgcdP82347 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SgcdP82347 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SgcdP82347 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcdP82347 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcdP82347 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SgcdP82347 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SgcdP82347 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.1□□□□□ -0.15
SgcdP82347 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SgcdP82347 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SgcdP82347 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SgcdP82347 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.1□□□□□ -0.15
SgcdP82347 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SgcdP82347 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.1□□□□□ -0.15
SgcdP82347 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.1□□□□□ -0.15
SgcdP82347 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.1□□□□□ -0.15
SgcdP82347 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcdP82347 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.1□□□□□ -0.15
SgcdP82347 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SgcdP82347 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.09□□□□□ -0.15
SgcdP82347 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SgcdP82347 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SgcdP82347 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SgcdP82347 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.09□□□□□ -0.15
SgcdP82347 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SgcdP82347 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcdP82347 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcdP82347 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcdP82347 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcdP82347 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcdP82347 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcdP82347 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SgcdP82347 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcdP82347 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcdP82347 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms