Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.02■□□□□ -0
Shox2P70390 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shox2P70390 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shox2P70390 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.02■□□□□ -0
Shox2P70390 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Shox2P70390 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Shox2P70390 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Shox2P70390 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.02□□□□□ -0.01
Shox2P70390 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shox2P70390 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shox2P70390 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shox2P70390 Gm26039-201ENSMUST00000158152 144 ntBASIC15.01□□□□□ -0.01
Shox2P70390 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.01□□□□□ -0.01
Shox2P70390 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Shox2P70390 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Shox2P70390 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.01□□□□□ -0.01
Shox2P70390 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shox2P70390 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Shox2P70390 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shox2P70390 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15□□□□□ -0.01
Shox2P70390 Gm12527-201ENSMUST00000117967 564 ntBASIC15□□□□□ -0.01
Shox2P70390 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15□□□□□ -0.01
Shox2P70390 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15□□□□□ -0.01
Shox2P70390 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Gm10602-201ENSMUST00000098239 609 ntBASIC15□□□□□ -0.01
Shox2P70390 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15□□□□□ -0.01
Shox2P70390 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Gm21009-201ENSMUST00000197169 1669 ntBASIC15□□□□□ -0.01
Shox2P70390 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shox2P70390 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.99□□□□□ -0.01
Shox2P70390 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Shox2P70390 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shox2P70390 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Shox2P70390 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.99□□□□□ -0.01
Shox2P70390 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.99□□□□□ -0.01
Shox2P70390 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shox2P70390 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.99□□□□□ -0.01
Shox2P70390 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shox2P70390 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shox2P70390 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms