Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.88□□□□□ -0.03
Lhx1P63006 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.88□□□□□ -0.03
Lhx1P63006 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Lhx1P63006 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx1P63006 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.87□□□□□ -0.03
Lhx1P63006 Mir1895-201ENSMUST00000122615 79 ntBASIC14.87□□□□□ -0.03
Lhx1P63006 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.87□□□□□ -0.03
Lhx1P63006 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.87□□□□□ -0.03
Lhx1P63006 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lhx1P63006 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Lhx1P63006 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Lhx1P63006 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx1P63006 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Celf4-206ENSMUST00000224553 1729 ntBASIC14.86□□□□□ -0.03
Lhx1P63006 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lhx1P63006 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Lhx1P63006 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.86□□□□□ -0.03
Lhx1P63006 Gm27494-201ENSMUST00000184735 189 ntBASIC14.86□□□□□ -0.03
Lhx1P63006 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.86□□□□□ -0.03
Lhx1P63006 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Gm45612-201ENSMUST00000211320 160 ntBASIC14.86□□□□□ -0.03
Lhx1P63006 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.86□□□□□ -0.03
Lhx1P63006 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lhx1P63006 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.86□□□□□ -0.03
Lhx1P63006 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lhx1P63006 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx1P63006 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Lhx1P63006 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.85□□□□□ -0.03
Lhx1P63006 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.85□□□□□ -0.03
Lhx1P63006 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx1P63006 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.85□□□□□ -0.03
Lhx1P63006 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.85□□□□□ -0.03
Lhx1P63006 Gm11025-201ENSMUST00000140773 466 ntBASIC14.85□□□□□ -0.03
Lhx1P63006 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.85□□□□□ -0.03
Lhx1P63006 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms