Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Tpm1P58771 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tpm1P58771 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Tpm1P58771 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tpm1P58771 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.94■□□□□ 0.3
Tpm1P58771 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm1P58771 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Tpm1P58771 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tpm1P58771 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tpm1P58771 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.93■□□□□ 0.3
Tpm1P58771 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tpm1P58771 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Gm6623-201ENSMUST00000173570 544 ntBASIC16.93■□□□□ 0.3
Tpm1P58771 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.93■□□□□ 0.3
Tpm1P58771 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tpm1P58771 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.93■□□□□ 0.3
Tpm1P58771 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.93■□□□□ 0.3
Tpm1P58771 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tpm1P58771 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm1P58771 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.92■□□□□ 0.3
Tpm1P58771 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tpm1P58771 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.92■□□□□ 0.3
Tpm1P58771 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.92■□□□□ 0.3
Tpm1P58771 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Tpm1P58771 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.92■□□□□ 0.3
Tpm1P58771 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tpm1P58771 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.92■□□□□ 0.3
Tpm1P58771 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tpm1P58771 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Tpm1P58771 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm1P58771 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Tpm1P58771 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tpm1P58771 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tpm1P58771 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tpm1P58771 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.91■□□□□ 0.3
Tpm1P58771 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tpm1P58771 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.91■□□□□ 0.3
Tpm1P58771 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tpm1P58771 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms