Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl4P58321 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl4P58321 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl4P58321 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl4P58321 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl4P58321 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl4P58321 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Uchl4P58321 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Uchl4P58321 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.14■□□□□ 0.17
Uchl4P58321 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.14■□□□□ 0.17
Uchl4P58321 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.14■□□□□ 0.17
Uchl4P58321 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Uchl4P58321 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl4P58321 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.13■□□□□ 0.17
Uchl4P58321 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Uchl4P58321 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.13■□□□□ 0.17
Uchl4P58321 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Uchl4P58321 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Uchl4P58321 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.13■□□□□ 0.17
Uchl4P58321 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.13■□□□□ 0.17
Uchl4P58321 Gm18246-201ENSMUST00000221023 728 ntBASIC16.13■□□□□ 0.17
Uchl4P58321 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.13■□□□□ 0.17
Uchl4P58321 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Uchl4P58321 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl4P58321 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.12■□□□□ 0.17
Uchl4P58321 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uchl4P58321 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.12■□□□□ 0.17
Uchl4P58321 Mir3113-201ENSMUST00000175478 76 ntBASIC16.12■□□□□ 0.17
Uchl4P58321 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.12■□□□□ 0.17
Uchl4P58321 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.12■□□□□ 0.17
Uchl4P58321 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Gm37935-201ENSMUST00000192012 982 ntBASIC16.12■□□□□ 0.17
Uchl4P58321 Gm2213-201ENSMUST00000197485 688 ntBASIC16.12■□□□□ 0.17
Uchl4P58321 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.12■□□□□ 0.17
Uchl4P58321 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Uchl4P58321 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Uchl4P58321 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Uchl4P58321 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl4P58321 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Uchl4P58321 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Uchl4P58321 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Uchl4P58321 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl4P58321 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.11■□□□□ 0.17
Uchl4P58321 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Uchl4P58321 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.11■□□□□ 0.17
Uchl4P58321 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Uchl4P58321 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms