Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cks2P56390 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cks2P56390 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Gm15794-201ENSMUST00000120182 631 ntBASIC12.68□□□□□ -0.38
Cks2P56390 Gm12134-201ENSMUST00000122109 520 ntBASIC12.68□□□□□ -0.38
Cks2P56390 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks2P56390 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cks2P56390 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.68□□□□□ -0.38
Cks2P56390 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.68□□□□□ -0.38
Cks2P56390 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cks2P56390 Gm44454-201ENSMUST00000198541 138 ntBASIC12.68□□□□□ -0.38
Cks2P56390 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.68□□□□□ -0.38
Cks2P56390 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.68□□□□□ -0.38
Cks2P56390 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.68□□□□□ -0.38
Cks2P56390 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cks2P56390 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks2P56390 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Cks2P56390 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.67□□□□□ -0.38
Cks2P56390 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cks2P56390 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Cks2P56390 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.67□□□□□ -0.38
Cks2P56390 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.67□□□□□ -0.38
Cks2P56390 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.67□□□□□ -0.38
Cks2P56390 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.67□□□□□ -0.38
Cks2P56390 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cks2P56390 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cks2P56390 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks2P56390 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Cks2P56390 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cks2P56390 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Gm8344-201ENSMUST00000119813 856 ntBASIC12.66□□□□□ -0.38
Cks2P56390 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cks2P56390 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.66□□□□□ -0.38
Cks2P56390 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.66□□□□□ -0.38
Cks2P56390 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cks2P56390 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cks2P56390 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks2P56390 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks2P56390 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks2P56390 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks2P56390 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks2P56390 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks2P56390 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks2P56390 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms